BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038E10SP1|AL430562
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig832 864 0.0
3x_Contig649 743 0.0
>3x_Contig832
Length = 3863
Score = 864 bits (436), Expect = 0.0
Identities = 436/436 (100%)
Strand = Plus / Minus
Query: 483 cttcagctctggttggtcttgggttgtaggtcatggattccaacatttgggtagcacaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 cttcagctctggttggtcttgggttgtaggtcatggattccaacatttgggtagcacaga 3804
Query: 543 taactggcttaccagccaagttacacttagcaatcaacttcttttgcacagcaaacactt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 taactggcttaccagccaagttacacttagcaatcaacttcttttgcacagcaaacactt 3744
Query: 603 gaggagctggaatttcaatacccaaatcacctctagcaaccataacaccgtcagtgacct 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3743 gaggagctggaatttcaatacccaaatcacctctagcaaccataacaccgtcagtgacct 3684
Query: 663 tcaagatatcgtcaaagttgttgacaccttgttggttttcaatcttaacaatgatcttga 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3683 tcaagatatcgtcaaagttgttgacaccttgttggttttcaatcttaacaatgatcttga 3624
Query: 723 tatccttaccttgctcacccaaaacttctctgatagtcaaaacatcttgagcggttctga 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3623 tatccttaccttgctcacccaaaacttctctgatagtcaaaacatcttgagcggttctga 3564
Query: 783 tgaaagaggcgaagaccatgtggacaccgttcttgacaccgaatttcaagtcagacttgt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3563 tgaaagaggcgaagaccatgtggacaccgttcttgacaccgaatttcaagtcagacttgt 3504
Query: 843 ccttttcggacaaagctggcaaatcgacatcggtacctggcaagttgacacccttgtgag 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3503 ccttttcggacaaagctggcaaatcgacatcggtacctggcaagttgacacccttgtgag 3444
Query: 903 aacaaatcttaccggc 918
||||||||||||||||
Sbjct: 3443 aacaaatcttaccggc 3428
>3x_Contig649
Length = 2488
Score = 743 bits (375), Expect = 0.0
Identities = 423/437 (96%), Gaps = 14/437 (3%)
Strand = Plus / Plus
Query: 1 gtcaaccaaaattccgaattccttggccttcttgacaccgaagttgattctcttttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 gtcaaccaaaattccgaattccttggccttcttgacaccgaagttgattctcttttcaac 2124
Query: 61 atcgacagtccattcggagtcagaggattcatcgtatacgaatgggaagacacctctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2125 atcgacagtccattcggagtcagaggattcatcgtatacgaatgggaagacacctctata 2184
Query: 121 tagatgagagaatctagcagctcttgggtttctagtaaccataacaattgggacatttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 tagatgagagaatctagcagctcttgggtttctagtaaccataacaattgggacatttgg 2244
Query: 181 cttgtacttggcaaccaatcttggagtgtcaccggtggtggataggacaatcaaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 cttgtacttggcaaccaatcttggagtgtcaccggtggtggataggacaatcaaagct-- 2302
Query: 241 ggccttttgttcaaatacagcagaaacagaagcagcagcgatagtttcagtggttgaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 --------gttcaaatacagcagaaacagaagcagcagcgatagtttcagtggttgaggt 2354
Query: 301 tggctttggagtcaagttt-cttaagtcatcgtaagttgggatgtatgggatggcttgtt 359
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2355 tggctttggagtcaagtttacttaagtcatcgtaagttgggatgt-tgggatggcttgtt 2413
Query: 360 cagcaatcaaagcagtttcagccatggtcttaacggcattgattgggtagttacccttgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2414 cagcaatcaaagcagtttcagccatggtcttaacggcattgattgggtagttacccttgg 2473
Query: 420 cagtttcaccagacaac 436
|| |||||||||||||
Sbjct: 2474 ca--ttcaccagacaac 2488
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6573
Number of Sequences: 1807
Number of extensions: 6573
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)